Difference between revisions of "FAQ AMS Glossary"
From Jimenez Group Wiki
Line 2: | Line 2: | ||
== Hardware and Data Acquisition == | == Hardware and Data Acquisition == | ||
+ | |||
+ | * '''ACSM''': Aerosol Chemical Speciation Monitor, also known as "Mini-AMS". A smaller and cheaper version of the AMS using a small quadrupole, designed for monitoring purposes. | ||
* '''AMS''': Aerosol Mass Spectrometer. In our community it always means the Aerodyne AMS, but a few other groups have named other instruments "AMS", which are unrelated to the Aerodyne AMS. | * '''AMS''': Aerosol Mass Spectrometer. In our community it always means the Aerodyne AMS, but a few other groups have named other instruments "AMS", which are unrelated to the Aerodyne AMS. | ||
Line 8: | Line 10: | ||
* '''DAQ''': Data Acquisition Software | * '''DAQ''': Data Acquisition Software | ||
+ | |||
+ | * Light Scattering: | ||
+ | |||
+ | * '''MAB-AMS''': Metastable Atom Bombardment AMS. An adaptation of the AMS which uses soft ionization for analysis of the OA with lower fragmentation. | ||
+ | |||
+ | * '''Mini-AMS''': see ACSM above. | ||
+ | |||
+ | * '''OA''': organic aerosol. Often also referred to as OM, organic mass. Some authors also refer to this as POM, for particulate organic mass. | ||
+ | |||
+ | * '''Q-AMS''': Quadrupole AMS. The original version of the AMS, described in Jayne et al. (AS&T 2000). | ||
* '''SP-AMS''': Soot Particle AMS. New instrument developed which combines the SP2 (Single Particle Soot Photometer) particle vaporization and the AMS ionization and mass spectrometry. | * '''SP-AMS''': Soot Particle AMS. New instrument developed which combines the SP2 (Single Particle Soot Photometer) particle vaporization and the AMS ionization and mass spectrometry. | ||
+ | * '''TOF-MS''': Time of Flight mass spectrometer | ||
== Analysis Software and Results == | == Analysis Software and Results == | ||
Line 36: | Line 49: | ||
* HR: High Resolution (as opposed to UMR, typically referring to either the High Resolution Time of Flight Aerosol Mass Spectrometer, or to the data derived from that instrument) | * HR: High Resolution (as opposed to UMR, typically referring to either the High Resolution Time of Flight Aerosol Mass Spectrometer, or to the data derived from that instrument) | ||
− | * ipf: Igor Procedure File | + | * '''ipf''': Igor Procedure File |
+ | |||
+ | * '''Open''': Mass spectra acquired when the chopper is in the 'open' position - both air and aerosols are entering and being detected | ||
+ | |||
+ | * '''PIKA''': Peak Integration by Peak Analysis. This is a somewhat contorted acronym, but this name really indicates "High Resolution Analysis" or HR analysis where individual peaks (C3H6 and C2H2O at ~ m/z 42). | ||
+ | |||
+ | * '''SPARROW''': Single PARicle Retrieval Of Waves. The Igor analysis tool for AMS light scattering data. | ||
+ | |||
+ | * '''SQUIRREL''': SeQUential Igor data RetRiEvaL. The Igor analysis tool for non-Quad AMS data. | ||
+ | |||
+ | * '''UMR''': Unit Mass Resolution (as opposed to HR: ie, signal observed at m/z 28 is UMR, whereas HR data typically shows two peaks, one from N2+ and another from CO+) | ||
Line 44: | Line 67: | ||
* '''HOA''': Hydrocarbon-like Organic Aerosol | * '''HOA''': Hydrocarbon-like Organic Aerosol | ||
− | |||
− | |||
* '''LV-OOA''': Low volatility-oxygenated organic aerosol | * '''LV-OOA''': Low volatility-oxygenated organic aerosol | ||
Line 51: | Line 72: | ||
* '''OOA''': Oxygenated Organic Aerosol | * '''OOA''': Oxygenated Organic Aerosol | ||
− | * | + | * '''POA''': Primary Organic Aerosol, that emitted into the atmosphere in the particle phase. PMF cannot determine POA directly, but with some assumptions it can be used to estimate the POA concentration. |
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | * | + | * '''PET''': PMF Evaluation Tool. An interface for examining the results of many PMF analyses. |
− | * | + | * '''PMF''': Positive Matrix Factorization |
− | * | + | * '''Q''' or '''Q value''': Q is the objective function that PMF minimizes to find its solution. It is the sum of the squared residual at each datapoint, divided by the squared error estimate for that datapoint. |
− | |||
− | |||
− | * | + | * '''SV-OOA''': Semi-Volatile Oxidized Organic Aerosol |
Revision as of 15:15, 23 February 2010
This is a glossary of terms and acronyms typically used by the AMS community. It is a work in progress - so is by no means complete or comprehensive. Please continue to add and edit!
Hardware and Data Acquisition
- ACSM: Aerosol Chemical Speciation Monitor, also known as "Mini-AMS". A smaller and cheaper version of the AMS using a small quadrupole, designed for monitoring purposes.
- AMS: Aerosol Mass Spectrometer. In our community it always means the Aerodyne AMS, but a few other groups have named other instruments "AMS", which are unrelated to the Aerodyne AMS.
- CRiTTR: Piece of software to run the pulsers and move the chopper independently of the AMS Data Acquisition software (DAQ)
- DAQ: Data Acquisition Software
- Light Scattering:
- MAB-AMS: Metastable Atom Bombardment AMS. An adaptation of the AMS which uses soft ionization for analysis of the OA with lower fragmentation.
- Mini-AMS: see ACSM above.
- OA: organic aerosol. Often also referred to as OM, organic mass. Some authors also refer to this as POM, for particulate organic mass.
- Q-AMS: Quadrupole AMS. The original version of the AMS, described in Jayne et al. (AS&T 2000).
- SP-AMS: Soot Particle AMS. New instrument developed which combines the SP2 (Single Particle Soot Photometer) particle vaporization and the AMS ionization and mass spectrometry.
- TOF-MS: Time of Flight mass spectrometer
Analysis Software and Results
- APES: Analytic Procedure for Elemental Separation. An Igor tool for performing an elemental analysis (i.e. O/C ratio). In Pika 1.07 most of this code was merged with the pika code, but a version of APES remain as a stand-alone Igor code.
- Background: In general this term should be avoided as it is too ambiguous. (Background ambient measurement conditions? Background instrumental signal? etc.) The use of 'Closed mass spectra' is encouraged where appropriate.
- Baseline: In a mass spectra, the 'region between the peaks' for an open, closed or difference mass spectra.
- Closed: The mass spectrum taken with the chopper in the 'blocked' position, and typically considered instrument background and gas-phase contribution to AMS signal
- Diff: The Difference Spectrum; difference in chopper-open mass spectrum and chopper-closed mass spectrum; typically considered the mass spectrum due to particle signal
- f_x: the fraction of the total organic signal that is observed at m/z = x. E.g. f_44 is the fraction of the total OA signal at m/z 44. Sometimes also written as 44/Org or 44/OA.
- fragments: a vaporized molecule is ionized in the AMS to a series of ions, which are then detected by either a quadrupole or time-of-flight mass spectrometer; the resulting ions are referred to as 'fragments'
- Non-refractory (NR) species: chemical components of aerosol that are volatilized in the AMS, and are observed in the "Difference spectrum". This requires evaporation in a time scale shorter than chopper open/closed movement, whish is typically 3-5 seconds. Examples include the usual AMS species: sulfate, nitrate, ammonium, chloride, and organic (OA). Note that these species can also have some semi-refractory signal, although this is typically a small fraction (5-10% of the NR signal under typical operating conditions).
- Refractory species: chemical components of aerosol that are not volatile enough to vaporize in the AMS in a time scale of at least a few hours, and thus are never observed by the instrument. Examples include black carbon (see SP2-AMS).
- Semi-refractory(SR) species: chemical components of aerosol that are relatively less volatile, and only slowly vaporize in the AMS. Functionally, they are observed in both the the Closed and Open signals (time-scale for vaporization is much longer than the time scale of open/closed chopper movement). Examples include some chemical forms of Pb (lead) and possibly NaCl.
- HR: High Resolution (as opposed to UMR, typically referring to either the High Resolution Time of Flight Aerosol Mass Spectrometer, or to the data derived from that instrument)
- ipf: Igor Procedure File
- Open: Mass spectra acquired when the chopper is in the 'open' position - both air and aerosols are entering and being detected
- PIKA: Peak Integration by Peak Analysis. This is a somewhat contorted acronym, but this name really indicates "High Resolution Analysis" or HR analysis where individual peaks (C3H6 and C2H2O at ~ m/z 42).
- SPARROW: Single PARicle Retrieval Of Waves. The Igor analysis tool for AMS light scattering data.
- SQUIRREL: SeQUential Igor data RetRiEvaL. The Igor analysis tool for non-Quad AMS data.
- UMR: Unit Mass Resolution (as opposed to HR: ie, signal observed at m/z 28 is UMR, whereas HR data typically shows two peaks, one from N2+ and another from CO+)
PMF-Related
- BBOA: Biomass Burning Organic Aerosol
- HOA: Hydrocarbon-like Organic Aerosol
- LV-OOA: Low volatility-oxygenated organic aerosol
- OOA: Oxygenated Organic Aerosol
- POA: Primary Organic Aerosol, that emitted into the atmosphere in the particle phase. PMF cannot determine POA directly, but with some assumptions it can be used to estimate the POA concentration.
- PET: PMF Evaluation Tool. An interface for examining the results of many PMF analyses.
- PMF: Positive Matrix Factorization
- Q or Q value: Q is the objective function that PMF minimizes to find its solution. It is the sum of the squared residual at each datapoint, divided by the squared error estimate for that datapoint.
- SV-OOA: Semi-Volatile Oxidized Organic Aerosol